Sequence-dependent thermodynamics of a coarse-grained DNA model P Šulc, F Romano, TE Ouldridge, L Rovigatti, JPK Doye, AA Louis The Journal of chemical physics 137 (13), 2012 | 361 | 2012 |
Introducing improved structural properties and salt dependence into a coarse-grained model of DNA BEK Snodin, F Randisi, M Mosayebi, P Šulc, JS Schreck, F Romano, ... The Journal of chemical physics 142 (23), 2015 | 356 | 2015 |
DNA hybridization kinetics: zippering, internal displacement and sequence dependence TE Ouldridge, P Šulc, F Romano, JPK Doye, AA Louis Nucleic acids research 41 (19), 8886-8895, 2013 | 270 | 2013 |
New metastable form of ice and its role in the homogeneous crystallization of water J Russo, F Romano, H Tanaka Nature materials 13 (7), 733-739, 2014 | 238 | 2014 |
Coarse-graining DNA for simulations of DNA nanotechnology JPK Doye, TE Ouldridge, AA Louis, F Romano, P Šulc, C Matek, ... Physical Chemistry Chemical Physics 15 (47), 20395-20414, 2013 | 233 | 2013 |
Patterning symmetry in the rational design of colloidal crystals F Romano, F Sciortino Nature communications 3 (1), 975, 2012 | 172 | 2012 |
A nucleotide-level coarse-grained model of RNA P Šulc, F Romano, TE Ouldridge, JPK Doye, AA Louis The Journal of chemical physics 140 (23), 2014 | 160 | 2014 |
Crystallization of tetrahedral patchy particles in silico F Romano, E Sanz, F Sciortino The Journal of chemical physics 134 (17), 2011 | 155 | 2011 |
Patchy from the bottom up F Romano, F Sciortino Nature materials 10 (3), 171-173, 2011 | 155 | 2011 |
Phase diagram of a tetrahedral patchy particle model for different interaction ranges F Romano, E Sanz, F Sciortino The Journal of Chemical Physics 132 (18), 2010 | 151 | 2010 |
Two dimensional assembly of triblock Janus particles into crystal phases in the two bond per patch limit F Romano, F Sciortino Soft Matter 7 (12), 5799-5804, 2011 | 137 | 2011 |
A comparison between parallelization approaches in molecular dynamics simulations on GPUs L Rovigatti, P Šulc, IZ Reguly, F Romano Journal of computational chemistry 36 (1), 1-8, 2015 | 121 | 2015 |
Direct simulation of the self-assembly of a small DNA origami BEK Snodin, F Romano, L Rovigatti, TE Ouldridge, AA Louis, JPK Doye ACS nano 10 (2), 1724-1737, 2016 | 98 | 2016 |
Tacoxdna: A user‐friendly web server for simulations of complex DNA structures, from single strands to origami A Suma, E Poppleton, M Matthies, P Šulc, F Romano, AA Louis, JPK Doye, ... Journal of computational chemistry 40 (29), 2586-2595, 2019 | 95 | 2019 |
Glass forming ability in systems with competing orderings J Russo, F Romano, H Tanaka Physical Review X 8 (2), 021040, 2018 | 92 | 2018 |
Coarse-grained simulations of DNA overstretching F Romano, D Chakraborty, JPK Doye, TE Ouldridge, AA Louis The Journal of chemical physics 138 (8), 2013 | 92 | 2013 |
Gels of DNA nanostars never crystallize L Rovigatti, F Smallenburg, F Romano, F Sciortino ACS nano 8 (4), 3567-3574, 2014 | 90 | 2014 |
Coarse-grained modelling of the structural properties of DNA origami BEK Snodin, JS Schreck, F Romano, AA Louis, JPK Doye Nucleic acids research 47 (3), 1585-1597, 2019 | 88 | 2019 |
Re-entrant DNA gels F Bomboi, F Romano, M Leo, J Fernandez-Castanon, R Cerbino, T Bellini, ... Nature communications 7 (1), 13191, 2016 | 77 | 2016 |
DNA hairpins destabilize duplexes primarily by promoting melting rather than by inhibiting hybridization JS Schreck, TE Ouldridge, F Romano, P Šulc, LP Shaw, AA Louis, ... Nucleic acids research 43 (13), 6181-6190, 2015 | 71 | 2015 |