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Dmitry Molodenskiy
Dmitry Molodenskiy
Senior Scientific Software Engineer, European Molecular Biology Laboratory, Hamburg outstation
Verified email at embl-hamburg.de - Homepage
Title
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Cited by
Year
ATSAS 3.0: expanded functionality and new tools for small-angle scattering data analysis
K Manalastas-Cantos, PV Konarev, NR Hajizadeh, AG Kikhney, ...
Journal of applied crystallography 54 (1), 343-355, 2021
5782021
SASBDB: Towards an automatically curated and validated repository for biological scattering data
AG Kikhney, CR Borges, DS Molodenskiy, CM Jeffries, DI Svergun
Protein science 29 (1), 66-75, 2020
1702020
Thermally induced conformational changes and protein–protein interactions of bovine serum albumin in aqueous solution under different pH and ionic strengths as revealed by SAXS …
D Molodenskiy, E Shirshin, T Tikhonova, A Gruzinov, G Peters, F Spinozzi
Physical Chemistry Chemical Physics 19 (26), 17143-17155, 2017
682017
Adding size exclusion chromatography (SEC) and light scattering (LS) devices to obtain high-quality small angle X-ray scattering (SAXS) data
MA Graewert, S Da Vela, TW Gräwert, DS Molodenskiy, CE Blanchet, ...
Crystals 10 (11), 975, 2020
492020
Autism-associated SHANK3 missense point mutations impact conformational fluctuations and protein turnover at synapses
M Bucher, S Niebling, Y Han, D Molodenskiy, F Hassani Nia, ...
Elife 10, e66165, 2021
202021
The role of SAXS and molecular simulations in 3D structure elucidation of a DNA aptamer against lung cancer
D Morozov, V Mironov, RV Moryachkov, IA Shchugoreva, PV Artyushenko, ...
Molecular Therapy-Nucleic Acids 25, 316-327, 2021
172021
An automated data processing and analysis pipeline for transmembrane proteins in detergent solutions
DS Molodenskiy, HDT Mertens, DI Svergun
Scientific reports 10 (1), 8081, 2020
162020
MPBuilder: a PyMOL plugin for building and refinement of solubilized membrane proteins against small angle X-ray scattering data
DS Molodenskiy, DI Svergun, HDT Mertens
Journal of Molecular Biology 433 (11), 166888, 2021
152021
3D-Beacons: decreasing the gap between protein sequences and structures through a federated network of protein structure data resources
M Varadi, S Nair, I Sillitoe, G Tauriello, S Anyango, S Bienert, C Borges, ...
GigaScience 11, giac118, 2022
112022
β2-Type Amyloidlike Fibrils of Poly-l-glutamic Acid Convert into Long, Highly Ordered Helices upon Dissolution in Dimethyl Sulfoxide
S Berbeć, R Dec, D Molodenskiy, B Wielgus-Kutrowska, C Johannessen, ...
The Journal of Physical Chemistry B 122 (50), 11895-11905, 2018
102018
Artificial neural networks for solution scattering data analysis
DS Molodenskiy, DI Svergun, AG Kikhney
Structure 30 (6), 900-908. e2, 2022
82022
Highly Tunable Nanostructures in a Doubly pH‐Responsive Pentablock Terpolymer in Solution and in Thin Films
FA Jung, M Schart, L Bührend, E Meidinger, JJ Kang, BJ Niebuur, ...
Advanced Functional Materials 31 (32), 2102905, 2021
72021
Interplay between various crystalline and hexatic-B phases in 75OBC liquid crystal: X-ray diffraction and calorimetry study
VP Voronov, AR Muratov, SN Sulyanov, DS Molodenskiy, ...
Liquid Crystals 47 (9), 1366-1378, 2020
52020
Rigid-to-flexible transition in a molecular brush in a good solvent at a semidilute concentration
JJ Kang, C Sachse, CH Ko, MA Schroer, SD Vela, D Molodenskiy, ...
Langmuir 38 (17), 5226-5236, 2022
42022
PP2A is activated by cytochrome c upon formation of a diffuse encounter complex with SET/TAF-Iβ
MÁ Casado-Combreras, F Rivero-Rodríguez, CA Elena-Real, ...
Computational and structural biotechnology journal 20, 3695-3707, 2022
22022
Детектирование конформационных изменений альбумина при его гликировании и термической денатурации методами флуоресцентной спектроскопии и малоуглового рентгеновского рассеяния
НР Ровнягина, ТН Тихонова, ДС Молоденский, ЕА Ширшин
Известия Саратовского университета. Новая серия. Серия Физика 17 (3), 179-190, 2017
22017
Thermal strains in focusing channels of the stations for X-ray diffraction analysis in the Sibir-2 storage ring
DM Kheĭker, EE Konoplev, DS Molodenskiĭ, VA Shishkov, ...
Crystallography Reports 55, 901-906, 2010
22010
Efficiency of the focusing channel of the Belok Station in the Sibir-2 storage ring
DS Molodenskiĭ, PV Dorovatovskiĭ, VV Zabrodskiĭ, DM Kheĭker
Crystallography Reports 55, 896-900, 2010
12010
PP2A is activated by cytochrome c upon formation of a diffuse encounter complex with SET/TAF-Iß
M Casado-Combreras, I Díaz-Moreno, G Gerbaud, M Martinho, ...
Comput. struct. biotechnol. j., 2022
2022
Molecular basis for the DNA damage-induced interaction between cytochrome c and the histone chaperone SET/TAF-I beta
MA Casado-Combreras, A Diaz-Quintana, CA Elena-Real, M Martinho, ...
FEBS OPEN BIO 11, 178-179, 2021
2021
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