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Sangerbox: a comprehensive, interactionfriendly clinical bioinformatics analysis platform
W Shen, Z Song, X Zhong, M Huang, D Shen, P Gao, X Qian, M Wang, ...
Imeta 1 (3), e36, 2022
366*2022
Majorbio Cloud: A onestop, comprehensive bioinformatic platform for multiomics analyses
Y Ren, G Yu, C Shi, L Liu, Q Guo, C Han, D Zhang, L Zhang, B Liu, H Gao, ...
IMeta 1 (2), e12, 2022
257*2022
Complex heatmap visualization
Z Gu
Imeta 1 (3), e43, 2022
249*2022
ImageGP: An easytouse data visualization web server for scientific researchers
T Chen, YX Liu, L Huang
Imeta 1 (1), e5, 2022
209*2022
iNAP: an integrated network analysis pipeline for microbiome studies
K Feng, X Peng, Z Zhang, S Gu, Q He, W Shen, Z Wang, D Wang, Q Hu, ...
IMeta 1 (2), e13, 2022
131*2022
ggClusterNet: An R package for microbiome network analysis and modularitybased multiple network layouts
T Wen, P Xie, S Yang, G Niu, X Liu, Z Ding, C Xue, YX Liu, Q Shen, ...
Imeta 1 (3), e32, 2022
84*2022
Linking soil fungi to bacterial community assembly in arid ecosystems
S Jiao, H Chu, B Zhang, X Wei, W Chen, G Wei
IMeta 1 (1), e2, 2022
80*2022
Ultrafast onepass FASTQ data preprocessing, quality control, and deduplication using fastp
S Chen
Imeta 2 (2), e107, 2023
65*2023
Deciphering factors driving soil microbial lifehistory strategies in restored grasslands
Y Yang, Y Dou, B Wang, Z Xue, Y Wang, S An, SX Chang
IMeta 2 (1), e66, 2023
64*2023
Ggtree: A serialized data object for visualization of a phylogenetic tree and annotation data
S Xu, L Li, X Luo, M Chen, W Tang, L Zhan, Z Dai, TT Lam, Y Guan, G Yu
IMeta 1 (4), e56, 2022
63*2022
MetOrigin: discriminating the origins of microbial metabolites for integrative analysis of the gut microbiome and metabolome
G Yu, C Xu, D Zhang, F Ju, Y Ni
IMeta 1 (1), e10, 2022
63*2022
Using PhyloSuite for molecular phylogeny and treebased analyses
CY Xiang, F Gao, I Jakovlić, HP Lei, Y Hu, H Zhang, H Zou, GT Wang, ...
Imeta 2 (1), e87, 2023
46*2023
OmicStudio: A composable bioinformatics cloud platform with realtime feedback that can generate highquality graphs for publication
F Lyu, F Han, C Ge, W Mao, L Chen, H Hu, G Chen, Q Lang, C Fang
Imeta 2 (1), e85, 2023
442023
EasyAmplicon: An easytouse, opensource, reproducible, and communitybased pipeline for amplicon data analysis in microbiome research
YX Liu, L Chen, T Ma, X Li, M Zheng, X Zhou, L Chen, X Qian, J Xi, H Lu, ...
IMeta 2 (1), e83, 2023
412023
Differential microbial assembly processes and cooccurrence networks in the soilroot continuum along an environmental gradient
Y Zhong, PO Sorensen, G Zhu, X Jia, J Liu, Z Shangguan, R Wang, ...
imeta 1 (2), e18, 2022
362022
A painless way to customize Circos plot: From data preparation to visualization using TBtools
C Chen, Y Wu, R Xia
Imeta 1 (3), e35, 2022
352022
Toward understanding the genetic bases underlying plantmediated “cry for help” to the microbiota
Z Wang, Y Song
IMeta 1 (1), e8, 2022
332022
Metabolite profiling of humanoriginated Lachnospiraceae at the strain level
R Abdugheni, WZ Wang, YJ Wang, MX Du, FL Liu, N Zhou, CY Jiang, ...
Imeta 1 (4), e58, 2022
282022
DeepKla: An attention mechanismbased deep neural network for protein lysine lactylation site prediction
H Lv, FY Dao, H Lin
iMeta 1 (1), e11, 2022
27*2022
Destabilized microbial networks with distinct performances of abundant and rare biospheres in maintaining networks under increasing salinity stress
C Li, L Jin, C Zhang, S Li, T Zhou, Z Hua, L Wang, S Ji, Y Wang, Y Gan, ...
iMeta 2 (1), e79, 2023
252023
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