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Keesha Erickson
Keesha Erickson
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Cited by
Year
Spaceflight modifies Escherichia coli gene expression in response to antibiotic exposure and reveals role of oxidative stress response
TR Aunins, KE Erickson, S Shrestha, L Stodieck, L Zea, A Chatterjee
Frontiers in microbiology 9, 336578, 2018
752018
Dissecting RAF inhibitor resistance by structure-based modeling reveals ways to overcome oncogenic RAS signaling
OS Rukhlenko, F Khorsand, A Krstic, J Rozanc, LG Alexopoulos, N Rauch, ...
Cell systems 7 (2), 161-179. e14, 2018
572018
Transcriptome-level signatures in gene expression and gene expression variability during bacterial adaptive evolution
KE Erickson, PB Otoupal, A Chatterjee
Msphere 2 (1), 10.1128/msphere. 00009-17, 2017
352017
Gene expression variability underlies adaptive resistance in phenotypically heterogeneous bacterial populations
K Erickson, P Otoupal, A Chatterjee
ACS Infectious Diseases, 10.1021/acsinfecdis.5b00095w, 2015
322015
CRISPR perturbation of gene expression alters bacterial fitness under stress and reveals underlying epistatic constraints
PB Otoupal, KE Erickson, A Escalas-Bordoy, A Chatterjee
ACS synthetic biology 6 (1), 94-107, 2017
312017
Facile accelerated specific therapeutic (FAST) platform develops antisense therapies to counter multidrug-resistant bacteria
KA Eller, TR Aunins, CM Courtney, JK Campos, PB Otoupal, KE Erickson, ...
Communications biology 4 (1), 331, 2021
222021
Transcriptome-based design of antisense inhibitors potentiates carbapenem efficacy in CRE Escherichia coli
TR Aunins, KE Erickson, A Chatterjee
Proceedings of the National Academy of Sciences 117 (48), 30699-30709, 2020
202020
Generalizing Gillespie’s direct method to enable network-free simulations
R Suderman, ED Mitra, YT Lin, KE Erickson, S Feng, WS Hlavacek
Bulletin of mathematical biology 81 (8), 2822-2848, 2019
202019
New insights into RAS biology reinvigorate interest in mathematical modeling of RAS signaling
KE Erickson, OS Rukhlenko, RG Posner, WS Hlavacek, BN Kholodenko
Seminars in cancer biology 54, 162-173, 2019
192019
The Resistome: A Comprehensive Database of Escherichia coli Resistance Phenotypes
JD Winkler, AL Halweg-Edwards, KE Erickson, A Choudhury, G Pines, ...
ACS Synthetic Biology 5 (12), 1566-1577, 2016
172016
Spaceflight modifies escherichia coli gene expression in response to antibiotic exposure and reveals role of oxidative stress response. Front Microbiol. 2018; 9: 310. Published …
TR Aunins, KE Erickson, N Prasad, SE Levy, A Jones, S Shrestha, ...
142018
The Tolerome: A Database of Transcriptome-Level Contributions to Diverse Escherichia coli Resistance and Tolerance Phenotypes
KE Erickson, JD Winkler, DT Nguyen, RT Gill, A Chatterjee
ACS Synthetic Biology 6 (12), 2302-2315, 2017
142017
ROS mediated selection for increased NADPH availability in Escherichia coli
TS Reynolds, CM Courtney, KE Erickson, LM Wolfe, A Chatterjee, ...
Biotechnology and Bioengineering 114 (11), 2685-2689, 2017
142017
Potentiating antibiotic efficacy via perturbation of non-essential gene expression
PB Otoupal, KA Eller, KE Erickson, J Campos, TR Aunins, A Chatterjee
Communications Biology 4 (1), 1267, 2021
132021
Modeling cell line-specific recruitment of signaling proteins to the insulin-like growth factor 1 receptor
KE Erickson, OS Rukhlenko, M Shahinuzzaman, KP Slavkova, YT Lin, ...
PLoS computational biology 15 (1), e1006706, 2019
122019
Complex systems in metabolic engineering
JD Winkler, K Erickson, A Choudhury, AL Halweg-Edwards, RT Gill
Current opinion in biotechnology 36, 107-114, 2015
122015
Constrictor: constraint modification provides insight into design of biochemical networks
KE Erickson, RT Gill, A Chatterjee
PloS one 9 (11), e113820, 2014
112014
Draft genome sequence for a clinical isolate of vancomycin-resistant Enterococcus faecalis
KE Erickson, NE Madinger, A Chatterjee
Genome Announcements 4 (3), 10.1128/genomea. 00584-16, 2016
62016
Draft genome sequences of clinical isolates of multidrug-resistant Acinetobacter baumannii
KE Erickson, NE Madinger, A Chatterjee
Genome Announcements 5 (5), 10.1128/genomea. 01547-16, 2017
52017
Transcriptome-level signatures in gene expression and gene expression variability during bacterial adaptive evolution. mSphere 2: e00009-17
KE Erickson, PB Otoupal, A Chatterjee
42017
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