| Reverse engineering and identification in systems biology: strategies, perspectives and challenges AF Villaverde, JR Banga Journal of the Royal Society Interface 11 (91), 20130505, 2014 | 300 | 2014 |
| Structural identifiability of dynamic systems biology models AF Villaverde, A Barreiro, A Papachristodoulou PLoS computational biology 12 (10), e1005153, 2016 | 266 | 2016 |
| MEIGO: an open-source software suite based on metaheuristics for global optimization in systems biology and bioinformatics JA Egea, D Henriques, T Cokelaer, AF Villaverde, JR Banga, ... BMC Bioinformatics 15, 136, 2014 | 192 | 2014 |
| Benchmarking optimization methods for parameter estimation in large kinetic models AF Villaverde, F Fröhlich, D Weindl, J Hasenauer, JR Banga Bioinformatics 35 (5), 830–838, 2019 | 145 | 2019 |
| MIDER: network inference with mutual information distance and entropy reduction AF Villaverde, J Ross, F Morán, JR Banga PloS one 9 (5), e96732, 2014 | 136 | 2014 |
| Parameter identifiability analysis and visualization in large-scale kinetic models of biosystems A Gábor, AF Villaverde, JR Banga BMC systems biology 11, 1-16, 2017 | 135 | 2017 |
| Observability and structural identifiability of nonlinear biological systems AF Villaverde Complexity 2019 (1), 8497093, 2019 | 118 | 2019 |
| Full observability and estimation of unknown inputs, states and parameters of nonlinear biological models AF Villaverde, N Tsiantis, JR Banga Journal of the Royal Society Interface 16 (156), 20190043, 2019 | 104 | 2019 |
| Reset control for passive bilateral teleoperation AF Villaverde, AB Blas, J Carrasco, AB Torrico IEEE Transactions on Industrial Electronics 58 (7), 3037-3045, 2011 | 98 | 2011 |
| On the relationship between sloppiness and identifiability OT Chis, AF Villaverde, JR Banga, E Balsa-Canto Mathematical biosciences 282, 147-161, 2016 | 97 | 2016 |
| BioPreDyn-bench: a suite of benchmark problems for dynamic modelling in systems biology AF Villaverde, D Henriques, K Smallbone, S Bongard, J Schmid, ... BMC systems biology 9, 1-15, 2015 | 96 | 2015 |
| Structural identifiability and observability of compartmental models of the COVID-19 pandemic G Massonis, JR Banga, AF Villaverde Annual reviews in control 51, 441-459, 2021 | 90 | 2021 |
| A cooperative strategy for parameter estimation in large scale systems biology models AF Villaverde, JA Egea, JR Banga BMC systems biology 6, 1-17, 2012 | 80 | 2012 |
| PEtab—Interoperable specification of parameter estimation problems in systems biology L Schmiester, Y Schälte, FT Bergmann, T Camba, E Dudkin, J Egert, ... PLoS computational biology 17 (1), e1008646, 2021 | 76 | 2021 |
| Reverse engineering cellular networks with information theoretic methods AF Villaverde, J Ross, JR Banga Cells 2 (2), 306-329, 2013 | 70 | 2013 |
| Input-dependent structural identifiability of nonlinear systems AF Villaverde, ND Evans, MJ Chappell, JR Banga IEEE Control Systems Letters 3 (2), 272-277, 2018 | 57 | 2018 |
| Data-driven reverse engineering of signaling pathways using ensembles of dynamic models D Henriques, AF Villaverde, M Rocha, J Saez-Rodriguez, JR Banga PLoS computational biology 13 (2), e1005379, 2017 | 54 | 2017 |
| Identifiability of large nonlinear biochemical networks AF Villaverde, A Barreiro MATCH Commun. Math. Comput. Chem 76 (2), 259-296, 2016 | 52 | 2016 |
| A protocol for dynamic model calibration AF Villaverde, D Pathirana, F Fröhlich, J Hasenauer, JR Banga Briefings in bioinformatics 23 (1), bbab387, 2022 | 50 | 2022 |
| Metabolic engineering with multi-objective optimization of kinetic models AF Villaverde, S Bongard, K Mauch, E Balsa-Canto, JR Banga Journal of biotechnology 222, 1-8, 2016 | 39 | 2016 |
Julio R. Banga ( ORCID 0000-0002-42...Research Professor, MBG-CSIC, Pontevedra (Spain)Verified email at csic.es
